Oh WOW! That was a headache!
So I have a several domains setup to use Google apps, mainly for the email functionality. Google is transitioning to a new infrastructure
The problem I had was that I use a lot of different Google services (Analytics, AdWords, AdSense, etc) and I have used the same email address for these accounts. This email address was part of my Google Apps. When my Google Apps was transitioned, I had a problem of conflicting accounts with the other Google serviced I used. When I tried to log on to my Analytics account, it told me that that account was in use by another user. I was effectly locked out of all of Analytics, AdWords, and AdSense. Anyone who used the free version of Google Apps, knows that it is impossible to get support on it. I found a phone number for Google AdWords (because that make money directly off of the user there) and got sent on a wild goose chase trying to resolve my issue. I hit a dead end in finding a number for Google Apps Enterprise support (I use the free addition). So after hours of trying to figure it out, this is how I resolved the Google Apps issue of conflicting accounts.
This document was the catalysis to solving the issue.
Basically I had to clear all of my cookies and then log on to Google with a temp account: user%mydomain@gtempaccount.com – user%mydomain is the email address you were previously using with @ replaced by % (mine was user%mdsaba.com@gtempaccount.com), using the same password as before.
Then I went to the dashboard: https://www.google.com/dashboard/
From here you can: move data out of this account. It will take to you a two column screen and allow your to log on to your Google Apps account and move the data.
Problem solved. Thanks for nothing Google support.